The detailed information of tRNA gene sequence


Sequence ID>CHL1810008714
Genome IDKC598090
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oceanica CCMP531 (KC598090)
Start position on genome 6543
End posion on genome 6615
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatataagta
tRNA gene sequence 
GCGTCTTTAGTTCAGTTGGTAGAACGTAGGTCTCCAAAACCTAATGTCGAGGGTTCAAGT
CCTTCAAGGCGTGtgt
Downstream region at tRNA end position 
tgtattttag
Secondary structure (Cloverleaf model)
>CHL1810008714	Trp	CCA
                   a      Gtgt tgtattttag
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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