The detailed information of tRNA gene sequence


Sequence ID>CHL1810008715
Genome IDKC598090
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oceanica CCMP531 (KC598090)
Start position on genome 10897
End posion on genome 10985
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataataaat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGTACAAAATTAATTG
TACCGAGGGTTCGAATCCCTTTCTCTCCTaag
Downstream region at tRNA end position 
actatttata
Secondary structure (Cloverleaf model)
>CHL1810008715	Ser	GCT
                   t      Taag actatttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACAAAATTAATTGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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