The detailed information of tRNA gene sequence


Sequence ID>CHL1810008730
Genome IDKC598090
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oceanica CCMP531 (KC598090)
Start position on genome 100499
End posion on genome 100426
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tatatgaatg
tRNA gene sequence 
GTGGGCGTAGCCAAGTGGTTAAGGCAATGGGTTGTGGTTCCGTCATGCGCGGGTTCAAAT
CCCGTCGTTCACCCtc
Downstream region at tRNA end position 
ttagtttatc
Secondary structure (Cloverleaf model)
>CHL1810008730	His	GTG
                   g      CCtc ttagtttatc
                     G - C
                     T - A
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       A C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     CATGC
                    A - T
                    T + G
                    G - C
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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