The detailed information of tRNA gene sequence


Sequence ID>CHL1810008732
Genome IDKC598090
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oceanica CCMP531 (KC598090)
Start position on genome 97566
End posion on genome 97479
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatgatctta
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGTCTGACTTGAAATCAGAAGAACTAGGAATGGTT
CCGTGGGTTCGAATCCCACTCTCTCTTCtc
Downstream region at tRNA end position 
aatattttta
Secondary structure (Cloverleaf model)
>CHL1810008732	Ser	TGA
                   a      TCtc aatattttta
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     AGAACTAGGAATGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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