The detailed information of tRNA gene sequence


Sequence ID>CHL1810008735
Genome IDKC598090
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oceanica CCMP531 (KC598090)
Start position on genome 44012
End posion on genome 43926
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatatcatat
tRNA gene sequence 
GCATCTGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCTCTCAAGAACGT
CGCTGGTTCGAACCCAGCCGGATGCACtt
Downstream region at tRNA end position 
tttatataca
Secondary structure (Cloverleaf model)
>CHL1810008735	Met	CAT
                   t      ACtt tttatataca
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     G - C          C A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCTCTCAAGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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