The detailed information of tRNA gene sequence


Sequence ID>CHL1810013642
Genome IDKJ958482
Search identical group
Phylum/ClassStramenopiles
SpeciesRhizosolenia imbricata (KJ958482)
Start position on genome 24230
End posion on genome 24316
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccaaataT
tRNA gene sequence 
GCATTCGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCCTCTGGAACGTC
GCTGGTTCGAACCCAGTCGGATGCATta
Downstream region at tRNA end position 
aaaacttatt
Secondary structure (Cloverleaf model)
>CHL1810013642	Met	CAT
                   T      ATta aaaacttatt
                     G - C
                     C - G
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C          C A
                    T     T G A C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCCTCTGGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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