The detailed information of tRNA gene sequence


Sequence ID>CHL1810013735
Genome IDKJ958485
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira weissflogii (KJ958485)
Start position on genome 55811
End posion on genome 55898
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctaatctttt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAATCTTTGCGGAT
TCCGTGGGTTCGAATCCCACTCTCGCCTtta
Downstream region at tRNA end position 
ttaaactaaa
Secondary structure (Cloverleaf model)
>CHL1810013735	Ser	TGA
                   t      Ttta ttaaactaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAATCTTTGCGGATTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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