The detailed information of tRNA gene sequence


Sequence ID>CHL1810024311
Genome IDKU164871
Search identical group
Phylum/ClassStramenopiles
SpeciesPleurocladia lacustris Sa2 (KU164871)
Start position on genome 71509
End posion on genome 71422
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaattccT
tRNA gene sequence 
GCATCTGTGGCCGAGTGGTTGAAGGCAGCGGACTCATAATCCGTCTTCTTATTAGAACAT
CGCTGGTTCGAAGCCAGCCAGATGCAAtt
Downstream region at tRNA end position 
tatttttttt
Secondary structure (Cloverleaf model)
>CHL1810024311	Met	CAT
                   T      AAtt tatttttttt
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T - A
                     G - C          G A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     CTTCTTATTAGAACATC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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