The detailed information of tRNA gene sequence


Sequence ID>CHL1810024316
Genome IDKU164871
Search identical group
Phylum/ClassStramenopiles
SpeciesPleurocladia lacustris Sa2 (KU164871)
Start position on genome 52506
End posion on genome 52419
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atatttttat
tRNA gene sequence 
GGAGAGATGGCAGAGATGGTCGATTGCGTCTGATTTGAAATCAGATGAACGTTTACACGT
TCCGTGGGTTCGAATCCGACTCTCTCCTaaa
Downstream region at tRNA end position 
acaatttttt
Secondary structure (Cloverleaf model)
>CHL1810024316	Ser	TGA
                   t      Taaa acaatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A G C C     A
    T A G A        G      | |   | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAACGTTTACACGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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