The detailed information of tRNA gene sequence


Sequence ID>CHL1810046958
Genome IDLC085348
Search identical group
Phylum/ClassViridiplantae
SpeciesVanilla aphylla (LC085348)
Start position on genome 35809
End posion on genome 35716
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttctatctG
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGATAGCCCCGGTCTTGAAAACCGGTATAGTCCTTAAAAAA
AACTATCGAGGGTTCGAATCCCTCTCTCTCCTTtt
Downstream region at tRNA end position 
acttacttca
Secondary structure (Cloverleaf model)
>CHL1810046958	Ser	TGA
                   G      TTtt acttacttca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G       + | | |                 T T
    T       T A G C
      T G A        C     TATAGTCCTTAAAAAAAACTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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