The detailed information of tRNA gene sequence


Sequence ID>CHL1810050190
Genome IDMF101427
Search identical group
Phylum/ClassRhodophyta
SpeciesPolysiphonia elongata (MF101427)
Start position on genome 139878
End posion on genome 139790
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cttttatact
tRNA gene sequence 
GGAGAAGTGGCTGAGAGGTTGAAAGCGGCAGATTGCTAATCTGTTGTATAATAATTGTTA
TACCGAGGGTTCGAATCCCTTCTTCTCCTttt
Downstream region at tRNA end position 
taaatctatt
Secondary structure (Cloverleaf model)
>CHL1810050190	Ser	GCT
                   t      Tttt taaatctatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T T C C C     A
      A G A        G      + | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TGTATAATAATTGTTATACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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