The detailed information of tRNA gene sequence


Sequence ID>CHL1810050309
Genome IDMF101434
Search identical group
Phylum/ClassRhodophyta
SpeciesHerposiphonia versicolor (MF101434)
Start position on genome 107165
End posion on genome 107250
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtcactacta
tRNA gene sequence 
GGAGAGGTGGTAGAGTTGGTTTATTGCGTCTGATTTGAAATCAGATGAACCGTCAGGTTC
CGTGGGTTCGAATCCCACCCTCTCCGtca
Downstream region at tRNA end position 
tataaaaata
Secondary structure (Cloverleaf model)
>CHL1810050309	Ser	TGA
                   a      Gtca tataaaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A T G       G T G G G     C
  G         + | + |                 T T
  T         T T G C
    T T A          G     TGAACCGTCAGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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