The detailed information of tRNA gene sequence


Sequence ID>CHL1810050393
Genome IDMF101438
Search identical group
Phylum/ClassRhodophyta
SpeciesPolysiphonia scopulorum (MF101438)
Start position on genome 104947
End posion on genome 104874
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attattggac
tRNA gene sequence 
CGCGGGGTAGAGCAGTTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCAATGGTTCAAA
TCCATTCCCCGCTAtac
Downstream region at tRNA end position 
tttatttaga
Secondary structure (Cloverleaf model)
>CHL1810050393	Met	CAT
                   c      Atac tttatttaga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T A C C     A
      T G A        A      | | | | |     A
    T       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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