The detailed information of tRNA gene sequence


Sequence ID>CHL1810059317
Genome IDMG755794
Search identical group
Phylum/ClassStramenopiles
SpeciesPlagiogrammopsis vanheurckii (MG755794)
Start position on genome 66306
End posion on genome 66219
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctaatctttt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAATCTTTGCGGAT
TCCGTGGGTTCGAATCCCACTCTCGCCTttt
Downstream region at tRNA end position 
taaaatttaa
Secondary structure (Cloverleaf model)
>CHL1810059317	Ser	TGA
                   t      Tttt taaaatttaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAATCTTTGCGGATTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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