The detailed information of tRNA gene sequence


Sequence ID>CHL1830000060
Genome IDEU168190
Search identical group
Phylum/ClassStramenopiles
SpeciesHeterosigma akashiwo NIES 293 (EU168190)
Start position on genome 23003
End posion on genome 23075
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttcatgaaaa
tRNA gene sequence 
GCCCCCATCGTCTAGAGGCCTAGGACACTTCCCTTTCACGGAAGTAACAGGGATTCGAAT
TCCCTTGGGGGTAttt
Downstream region at tRNA end position 
agtagaatat
Secondary structure (Cloverleaf model)
>CHL1830000060	Glu	TTC
                   a      Attt agtagaatat
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C T     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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