The detailed information of tRNA gene sequence


Sequence ID>CHL1830000159
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 39656
End posion on genome 39730
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttaatatatT
tRNA gene sequence 
GCCCCCATCGTCTAGAGGCCTAGGACAGCTCCCTTTCACGGAGCAGACAGGGATTCGAAT
TCCCTTGGGGGTATtt
Downstream region at tRNA end position 
ttttagacga
Secondary structure (Cloverleaf model)
>CHL1830000159	Glu	TTC
                   T      ATtt ttttagacga
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C T     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGAC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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