The detailed information of tRNA gene sequence


Sequence ID>CHL1830000433
Genome IDKC509522
Search identical group
Phylum/ClassStramenopiles
SpeciesCylindrotheca closterium ccmp1855 (KC509522)
Start position on genome 54649
End posion on genome 54575
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
taaaattttT
tRNA gene sequence 
GCCCCCATCGTCTAGTGGCCTAGGACAGCTCCCTTTCACGGAGCAGACAGGGATTCGAAT
TCCCTTGGGGGTAAtt
Downstream region at tRNA end position 
ctatactgat
Secondary structure (Cloverleaf model)
>CHL1830000433	Glu	TTC
                   T      AAtt ctatactgat
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C T     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGAC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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