The detailed information of tRNA gene sequence


Sequence ID>CHL1830000444
Genome IDKC509525
Search identical group
Phylum/ClassStramenopiles
SpeciesLithodesmium undulatum ccmp1797 (KC509525)
Start position on genome 12019
End posion on genome 11947
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aaactttaaa
tRNA gene sequence 
GCCCCCATCGTCTAGTGGCCTAGGACAGCTCCCTTTCACGGAGCAGACAGGGATTCGAAT
TCCCTTGGGGGTAtta
Downstream region at tRNA end position 
tattaattaa
Secondary structure (Cloverleaf model)
>CHL1830000444	Glu	TTC
                   a      Atta tattaattaa
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C T     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGAC
                    G - C
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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