The detailed information of tRNA gene sequence


Sequence ID>CHL1861000127
Genome IDEU912438
Search identical group
Phylum/ClassStramenopiles
SpeciesVaucheria litorea (EU912438)
Start position on genome 67254
End posion on genome 67565
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttctatctaa
tRNA gene sequence 
GGGGGCGTGGCGGAACGGTAGACGCAACGGACTTAAAATCCGTTGACTCAAAATAGTCGT
GGGGGTTCAAGTCCCCCCGCCCCCAtaa
Downstream region at tRNA end position 
ctaaattaat
Secondary structure (Cloverleaf model)
>CHL1861000127	Leu	TAA
                   a      Ataa ctaaattaat
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C C C     A
      C A A        G      | | | | |     A
    G       G G C G       G G G G G     C
    G         | | |                 T T
    T       A C G C
      A G          A     TGACTCAAAATAGTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=227 (in A-loop)
ATATTGAGCTTTAATAAAGATTATTTATTAAAAGTAAGTTCTCAAATTCAAGGAAATCTAAATAAAAATC
ATATTATATTTTTACATGATAACCCTGAGCCAAGAATTAATTAATTAATTAAGGTGCAGAGACTCAACGG
GAACTACCTTAACAAATAAAAAAAGTTAGGTAAAGAGAGAGTCCAACTTTCAACTAATAAGTAAGTGAAA
ACTAAAAGAAAGTGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK