The detailed information of tRNA gene sequence


Sequence ID>CHL1861000187
Genome IDGQ861354
Search identical group
Phylum/ClassViridiplantae
SpeciesBrassica napus ZY036 (GQ861354)
Start position on genome 46197
End posion on genome 46594
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aagcaaaaag
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCTACGGACTTAATATCCGTTGACTTTTAAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCAacc
Downstream region at tRNA end position 
ctactcccta
Secondary structure (Cloverleaf model)
>CHL1861000187	Leu	TAA
                   g      Aacc ctactcccta
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGACTTTTAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=313 (in A-loop)
TGGATTGAGCCTTGGTATGGAAACCTACTAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAACA
ATGGGCAATCCTGAGCCAAATCCTGGGTTACGCGAACAAACCAGAGTTTAGAAAGCGGGATAGGTGCAGA
GACTCAATGGAAGCTGTTCTAACAAATGGAGTTCAATCCCTTGTGTTGAATCAAACGATTCACTTCATAG
TCTGATAGATCCTTGGTGGAACTTATTAATCGGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAAT
ACTGACAACAATGAAATTTATAGTAAGATGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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