The detailed information of tRNA gene sequence


Sequence ID>CHL1861000193
Genome IDGQ892829
Search identical group
Phylum/ClassViridiplantae
SpeciesBryopsis hypnoides (GQ892829)
Start position on genome 149985
End posion on genome 149694
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
taaggaattt
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCTGCGGACTTAAGATCCGTTGATTTTAAACAATCG
TGAGGGTTCAAGTCCCTCTATCCCCAgag
Downstream region at tRNA end position 
gcatcttttg
Secondary structure (Cloverleaf model)
>CHL1861000193	Leu	TAA
                   t      Agag gcatcttttg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGATTTTAAACAATCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=206 (in A-loop)
TTTTGAGCTTTTTTTAAGAAGATTAAAAAAATGTATAAACCCTAAATCGAGGAAACCTTTTAGATAACCA
CGAGCTAGTAGAAATACGAGTGTAGAGACTTTACAGGTTAAACCTAAAAAATTAGTCAATAATTTTGGTA
AAGAGAAAGTCCAGCTTTCTTAATTCAATAAGTCTAAAATACTTATTTTTTTAGAGAAATTCGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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