The detailed information of tRNA gene sequence


Sequence ID>CHL1861000247
Genome IDHM029370
Search identical group
Phylum/ClassViridiplantae
SpeciesPisum sativum (HM029370)
Start position on genome 13183
End posion on genome 12667
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agaaaaaacg
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTAATATCCGTCGACTTTAGAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCAaaa
Downstream region at tRNA end position 
gccaattaaa
Secondary structure (Cloverleaf model)
>CHL1861000247	Leu	TAA
                   g      Aaaa gccaattaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTAGAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=432 (in A-loop)
TGGATTGAGCCTTGGTATGGAAACTTACCAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATTCAAA
ATGGGCAATCCTGAGCCAAATCCTTCTTTCTGAAAACAAATAAAAGTTCAGAAAGTGAAAATCAAAAAAG
GATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAATGGAGTTGACAACATTCAATTGATTAATGAAG
ATTTCTAACTTCTATTTGTAACTATTTTGATTCTATCACAATGGAAACATTAGAATCAATTACAACTGGA
AGAAAAAATGACTGAATATTCATTGCTCAAATCAGTCACTCCACCATAATCTGATGGATCTTTTGAATAA
CTGATTAATCAGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACATCAATGAAATTTTT
AGTAAGAGGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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