The detailed information of tRNA gene sequence


Sequence ID>CHL1861000377
Genome IDJF345175
Search identical group
Phylum/ClassViridiplantae
SpeciesFragaria vesca subsp. vesca (JF345175)
Start position on genome 48752
End posion on genome 49256
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
atcacaaagg
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTAATATCCGTCGACTTTAGAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCAaaa
Downstream region at tRNA end position 
agacccggtt
Secondary structure (Cloverleaf model)
>CHL1861000377	Leu	TAA
                   g      Aaaa agacccggtt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTAGAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=420 (in A-loop)
TGGATTGAGCCTTGGTATGGAAACCTACCAAGTGATAACTTTCAAATTCAGAGAAACCCTGGAATTAAAA
ATGGGCAATCCTGAGCCAAATCCCGTTTTATGAAAACAAACAAGGGTTTCAGAAAGCGAGAATAAATAAA
GGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAATGGAGTTGGCTGCATTGTGTTCGTAGTAAAG
GAATCGAAACTTCCGAAAGGATGAAAGATAAACCTATATACATATGTATACTTACTGAAATACTATCGCC
AAATAATTCAAAATGATTAATGACGACTCCGTCCGCTAAATCTTTTTATTTTTAAAAATTTTTAAATCGG
ATAAGAATAAAGATAGAGTCCCATTCTACATGTCAATATCGACAACAATGAAATTTATAGTAAGAGGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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