The detailed information of tRNA gene sequence


Sequence ID>CHL1861000781
Genome IDKC427271
Search identical group
Phylum/ClassViridiplantae
SpeciesGnetum montanum (KC427271)
Start position on genome 37462
End posion on genome 37886
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tagaaaaaaa
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTGATATCCGTTGGTTTACGAAACTGT
GAGGGTTCAAGTCCCTCTATCCCCAagc
Downstream region at tRNA end position 
ccggttttta
Secondary structure (Cloverleaf model)
>CHL1861000781	Ser	TGA
                   a      Aagc ccggttttta
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGGTTTACGAAACTGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T G A
intron: position=38, length=340 (in A-loop)
TTTCTTGAGCTTTAGTTGGAAAGCCTACTAAATGGGAGCTTTCCAATACAGGGAATCCTAGGGTATCCGA
ATAGGTAATCCTGAGCCAAATCCAATTTGAAGAGATAGTCACTAGTCTCTTTTCTTAAAAAAAAGGGGGG
GGGGGGTAGGCGCAGAGACTCGATGGAAGCTATTCTAACGAACGATTCTTAGTAAACCAAAACCGGGCTT
TAATTTGGAAAAAGGCGGAAAATCTTGATTAGTATAAATAAATATGATTGAACGAGAATAAAGGTAGAGT
CCTTTTCTGCTAGTTATAGTTTATTATTATAGCACCAAAGCAATTTGGAGTAGGGAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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