The detailed information of tRNA gene sequence


Sequence ID>CHL1861000833
Genome IDKC598088
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis salina CCMP537 (KC598088)
Start position on genome 34477
End posion on genome 34751
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttttagctta
tRNA gene sequence 
GGGGGCGTGGTGGAATGGTAGACACAACGGACTTAAAATCCGTTGACTATTACAGTCGTG
GGGGTTCAAGTCCCCCCGCCCCCAttt
Downstream region at tRNA end position 
ataaaaacaa
Secondary structure (Cloverleaf model)
>CHL1861000833	Leu	TAA
                   a      Attt ataaaaacaa
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    G       G G T G       G G G G G     C
    G         | | |                 T T
    T       A C A C
      A G          A     TGACTATTACAGTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=191 (in A-loop)
TTTTGAGCATTAATTTGTAAGTTCTCAAATTCAGAAAAAGTCTTTCCTGATACCTGGATAGAACAATTCT
GAGCCAACTCATAAAAGTGAAAAGGTGCAGAGACTCAATGGGAACTACCCGCGAGGTAAAGATAGAGTCC
ATACTTAAAGTAGAAAATAATCACTAAATTGATATTTCTATAAAGTAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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