The detailed information of tRNA gene sequence


Sequence ID>CHL1861001126
Genome IDKJ397925
Search identical group
Phylum/ClassViridiplantae
SpeciesChlorella sorokiniana crs4 (KJ397925)
Start position on genome 66026
End posion on genome 65690
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gttgtctttc
tRNA gene sequence 
GGGGATATGGCGGAATCGGCAGACGCAACGGACTTAAAATCCGTTGGTTCATTGAACCGT
GAGAGTTCAAGTCTCTCTATCCCCAaac
Downstream region at tRNA end position 
tacaaaactg
Secondary structure (Cloverleaf model)
>CHL1861001126	Leu	TAA
                   c      Aaac tacaaaactg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C T C     A
      T A A        G      | | | | |     A
    C       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     TGGTTCATTGAACCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=252 (in A-loop)
GGTACAACTTCACTCATATTTTGAGCCTTTAAAAGGAAACTTTTAAAGTGAATGCTCTCAAATTCAGGGA
AACTTTATTTTTAATGAAAAATTTTAAGTAATCCTGAGTCAACTTAAGAAAAATTTTCTTAAGAGGTGCA
GAGACTCGACGGGAGCTATCCTAATACAATAACAAAACAGGGAAAATCTTTTCTTTAAAGTAACTGTTGT
TTACTGTGAGGATAAAGAGAGAGTCCAGTTTCATATCTGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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