The detailed information of tRNA gene sequence


Sequence ID>CHL1861001146
Genome IDKJ461682
Search identical group
Phylum/ClassViridiplantae
SpeciesMesotaenium endlicherianum (KJ461682)
Start position on genome 41871
End posion on genome 41567
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tgcgattgtg
tRNA gene sequence 
GGGGGCATGGCGAAATTGGCAGACGCAACGGACTTAAGATCCGTTGGCTTACACAGCCGT
GAGGGTTCAAGTCCCTCTGCCCCCAtac
Downstream region at tRNA end position 
ttaatcaagc
Secondary structure (Cloverleaf model)
>CHL1861001146	Leu	TAA
                   g      Atac ttaatcaagc
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        A     TGGCTTACACAGCCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G *
                    T A A
intron: position=38, length=220 (in A-loop)
CATGTTGAGCCCTTTAGGGGGAACTCTAAAGGTGTAGGCTTCCAAATTCAGGGAATCCTTGCAGACACAA
AAGGCAATCCTGAGCCAAATCTTGTGTATTTTAGACAAGAAAGGTGCAGAGACTCGACGGAAGCTATCCT
GAAAAGAACTTCAGGATAAAGAGAGAGTCCGCCTGTGAAGGTTGAAATTCAGCCGCAATGTAAGTTGCAC
ATAGACGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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