The detailed information of tRNA gene sequence


Sequence ID>CHL1861001421
Genome IDKM462872
Search identical group
Phylum/ClassViridiplantae
SpeciesXylochloris irregularis (KM462872)
Start position on genome 116297
End posion on genome 115842
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
taaacaccaa
tRNA gene sequence 
GGGGATATGGCGGAATTGGTAGACGCAACGGACTTAAAATCCGTTGATTTCAAAAGTCGT
GAGGGTTCAAGTCCCTCTATCCCCAaaa
Downstream region at tRNA end position 
actattgttt
Secondary structure (Cloverleaf model)
>CHL1861001421	Leu	TAA
                   a      Aaaa actattgttt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     TGATTTCAAAAGTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=371 (in A-loop)
GGTTCGATTTGTTTGAGCTCTTTAGAGTAGACTTTAAAGATGGAAACTTTCAAAGTCAGGAGATTTTTTT
AAACTAAAAAATCCTGAATCAATTCAAATTTGGAAGGTTTTTGAAAGATTCAGAGACTCGAAGGAAGTTA
CCCTAGAGAATTTACCACTAACATGTTTTTCTAAACTTTAATCTGAACAGAGTTCAGACAAAAGGACAAG
AGAACGTAGTTTTTGTTTTTCAAAGCTTTGATTTGAAGAAGGGAAGCTTTGAAAAAATCAAAACAACGAA
CATGTTTTGATATGAATAAAATATAGAAAAAATCTCGGGTAAAGAGAGAGTCCGCTTCACCCTCATCTTG
TTGATGGAAAACTAAGTGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK