The detailed information of tRNA gene sequence


Sequence ID>CHL1861001431
Genome IDKM462888
Search identical group
Phylum/ClassViridiplantae
SpeciesMarvania geminata (KM462888)
Start position on genome 85197
End posion on genome 84861
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaatatacc
tRNA gene sequence 
GGGGATATGGCGGAATCGGTAGACGCAACGGACTTAAAATCCGTTGGTTTTTTTAACCGT
GAGAGTTCAAGTCTCTCTATCCCCAaat
Downstream region at tRNA end position 
agaaatgcat
Secondary structure (Cloverleaf model)
>CHL1861001431	Leu	TAA
                   c      Aaat agaaatgcat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C T C     A
      T A A        G      | | | | |     A
    C       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     TGGTTTTTTTAACCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=252 (in A-loop)
GGTGCTATTTGAGCCGTTAGTAGGAAACTATTGACGTGTATGCTCTCAAATTCAGGGAAATTTTGAGCCT
TTGATGGTGAATAAACAATCCTGAGTCAATTTAACGCACTGGAACAGCACTGCTGTTTCTGTTAAAAGGT
GCAGAGACTCGACGGGAGCTATCCTTCAGTTTTTGCGTAGCATCACTACGTACTAGAACAGGATAAAGAG
AGAGTCCATAAGCTTCACAAAATTTACTTTTAAAGGCTGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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