The detailed information of tRNA gene sequence


Sequence ID>CHL1861001907
Genome IDKT199248
Search identical group
Phylum/ClassViridiplantae
SpeciesNeochloris aquatica UTEX 138 (KT199248)
Start position on genome 53659
End posion on genome 53916
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
attaaataag
tRNA gene sequence 
GGGGATATGGCGGAATGGTAGACGCTACGGACTTAAAATCCGTTGATCTTTTCGATCGTG
AGGGTTCAAGTCCCTCTATCCCCAaaa
Downstream region at tRNA end position 
taaagaagta
Secondary structure (Cloverleaf model)
>CHL1861001907	Leu	TAA
                   g      Aaaa taaagaagta
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGATCTTTTCGATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=174 (in A-loop)
AATTTTTTGAGCCTTTTTAAAGGAATTTAAAAAGTGAATACTTTCAAATTCAGAAAAATTTTTTAATAAA
AGAAAAATAATTCTGAGCCAATAAAATAATTTTAAGGTGCAGAGACTTAACGAAAGCTATTTTAATAAAA
TAAAGATAAAGTCCAATTAAAACTAGTTTAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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