The detailed information of tRNA gene sequence


Sequence ID>CHL1861001910
Genome IDKT199252
Search identical group
Phylum/ClassViridiplantae
SpeciesChlorotetraedron incus SAG 43.81 (KT199252)
Start position on genome 53570
End posion on genome 53984
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gaataaaaaa
tRNA gene sequence 
GGGGATATGGCGGAATGGTAGACGCTGCGGACTTAAAATCCGTTGATCATTGCGATCGTG
AGGGTTCAAGTCCCTCTATCCCCAaaa
Downstream region at tRNA end position 
atttaaaata
Secondary structure (Cloverleaf model)
>CHL1861001910	Leu	TAA
                   a      Aaaa atttaaaata
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGATCATTGCGATCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=331 (in A-loop)
GACTCATAAACTTTTTAGTTATTTTGAGCTTTTTTATAGTGATTTAAAAAGTGAATGCTTTCAAATTCAG
GAAAAGCTTTTTACAAAATTTTTTAATACTTTATTTTTATAGTATTTTATCTCTCTTGAGAAAAAATCTA
CAATTGTAGATTTTGATAACTGAAAAATAAAACGAAAAAGAAAAAGACAAAGACTAATACTGAGCCAAGA
GACAAAAATTAGAAATGTTGTCTTCGGTGCAGAGACTCAATGAAAGCTATCGTCTTTTTATTTAAAGACG
ATAAAGATAGAGTCCAAAAAATTTTTTTAACTAAATATAAATTTTTAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK