The detailed information of tRNA gene sequence


Sequence ID>CHL1861001911
Genome IDKT199253
Search identical group
Phylum/ClassViridiplantae
SpeciesBracteacoccus minor UTEX 66 (KT199253)
Start position on genome 22874
End posion on genome 22466
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtattaatca
tRNA gene sequence 
GGGGATATGGCGGAATGGTAGACGCTACGGACTTAAAATCCGTTGATCTTTTCGATCGTG
AGGGTTCAAGTCCCTCTATCCCCAatt
Downstream region at tRNA end position 
tgatttttaa
Secondary structure (Cloverleaf model)
>CHL1861001911	Leu	TAA
                   a      Aatt tgatttttaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGATCTTTTCGATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=325 (in A-loop)
AAAATAAACCTATATTTACTTATAAACTATTGATTAATTATGAGAATACAGTAAGTTCACTATAAAATCA
ATGGTTCGATTGAGCTTTTTTAAAGAAATTTAAAAAATGCATGCTCTCAAAGTCAGGAAAACTTCAATTA
GCTTTTAATATTTTTTGTGGTTTAACCTTCAAAAAAATCATTTGAAATAAGCAATCCTGAGCCAAATCGA
AGCTTTTATTCAAACAAAAGTAACTCGACCGGTGCAGAGACTCGACGAGAGCTATCTTTAAATAGATAAA
GAGAGAGTCCGTTCTTCCAATCTAACTTATTAGACACAAATGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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