The detailed information of tRNA gene sequence


Sequence ID>CHL1861001912
Genome IDKT199254
Search identical group
Phylum/ClassViridiplantae
SpeciesBracteacoccus aerius UTEX 1250 (KT199254)
Start position on genome 101729
End posion on genome 101376
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
atatgaatta
tRNA gene sequence 
GGGGATATGGCGGAATGGTAGACGCTACGGACTTAAAATCCGTTGATCTTTTCGATCGTG
AGGGTTCAAGTCCCTCTATCCCCAttt
Downstream region at tRNA end position 
tggttttttc
Secondary structure (Cloverleaf model)
>CHL1861001912	Leu	TAA
                   a      Attt tggttttttc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGATCTTTTCGATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=270 (in A-loop)
AATATTAATAATTATTTATGTTTTGATTGAGCTTTTTTAAAGAAATTTAAAAAATGTATGCTCTCAAAGT
CAGGAAAACTTTAGATTCTGTTCGACATTAATTTCCAATTTCAATATAAATCGAAATTAATAATTGAAAA
ATAAGCAATCCTGAGCCAAATTGAGTTTGACACATAATGAAAAATCTTACTCAGTAGGTGCAGAGACTCG
ACGAGAGCTATCTTTAGTTAGATAAAGAGAGAGTCCATTCTTCAAATGTAAAGTTTGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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