The detailed information of tRNA gene sequence


Sequence ID>CHL1861002705
Genome IDKU646491
Search identical group
Phylum/ClassViridiplantae
SpeciesNetrium digitus (KU646491)
Start position on genome 25452
End posion on genome 25073
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ttttatgata
tRNA gene sequence 
GGGGGCATGGCGGAATGGTAGACGCTACGGACTTAATATCCGTTGATCTTATCGATTGTG
AGGGTTCAAGTCCCTCTGCCCCCAtat
Downstream region at tRNA end position 
ttcaatttat
Secondary structure (Cloverleaf model)
>CHL1861002705	Leu	TAA
                   a      Atat ttcaatttat
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGATCTTATCGATTGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=296 (in A-loop)
AATAAAATTGAGCTCGATAAAAGGAAACTTTTTTCGTGTAAGCTTTCAGATTCAGGGGAAACTCGGATGC
ATAATGAAGAGGAAATCCTGAGCCAAAATTTATTATAAATAAAATAGGTGCAGAGACTCAATGGAAGCTA
TTCTAACGTGCAATGAAGATTATATATATCTTGTATATTAATTCGTTATCTTTTTTATGTATTAATATAT
ACAGATTTTCTTCCTAGACGAGGATAAAGAGAGAGTCCCTCTTACAGGTTCATTTAAACCGCAATGAGAA
TTGTAGTAAGAAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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