The detailed information of tRNA gene sequence


Sequence ID>CHL1861004188
Genome IDKY432778
Search identical group
Phylum/ClassViridiplantae
SpeciesGastridium ventricosum (KY432778)
Start position on genome 46512
End posion on genome 47019
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaggaaact
tRNA gene sequence 
GGGGATATGGCGAAATCGGTAGACGCTACGGACTTGATATCCGTCGACTTTATAAGTCGT
GAGGGTTCAAGTCCCTCTATCCCCAaac
Downstream region at tRNA end position 
cctcttttat
Secondary structure (Cloverleaf model)
>CHL1861004188	Ser	TGA
                   t      Aaac cctcttttat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    C       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTATAAGTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T G A
intron: position=38, length=423 (in A-loop)
TGTATTGAGCCTTGGTATGGAAACCTGCTAAGTGGTAACTTCCAAATTCAGAGAAACCCTGGAATTAAAA
AAGGGCAATCCTGAGCCAAATCCGTGTTTTTTTTGAGAAAACAAAGGGGTTCTCGAATCGAACTAGAATA
CAAAGGAAAAGGATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACGAATCGAGTTAATTACGTTGTGTT
GTTAGTGGAACTCCTTCTAAATTTGAGAAAGAAGGGCTTTATACATCTAATAAACACGTATAGATACTGA
CATAGCAAACGATTAATCACAGAATGCATATTATAATATATGTTATTTATTCTTTTTTAGGTGGATTAAT
CGAACGAGGACAAAGAGAGAGTCCCATTCTACATGTCAATACTGACAACAATGAAATTTCTAGTAAAAGG
AAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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