The detailed information of tRNA gene sequence


Sequence ID>CHL1861004613
Genome IDKY702720
Search identical group
Phylum/ClassViridiplantae
SpeciesAneura pinguis (KY702720)
Start position on genome 52151
End posion on genome 52541
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cggaggtatg
tRNA gene sequence 
GGGGGTGTGGCGGAATTGGTAGACGCTGCGGACTTAATATCCGTTGGCTTAACAGACCGT
GAGGGTTCAAGTCCCTCCACCCCCAgtc
Downstream region at tRNA end position 
agtaaagaat
Secondary structure (Cloverleaf model)
>CHL1861004613	Leu	TAA
                   g      Agtc agtaaagaat
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGGCTTAACAGACCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=306 (in A-loop)
TCGATCGGGCCTCGGTGGAGAAATCGACTGAGTGATTGTTCCCATATGCAGGGAAACCTAGGTTGTAAAC
ATATTAGGCAATCCTGAGCCAACTTTCGATTATGAAATAGGTGCAGAGACTCGAAGGGAACCATCCTAAC
CAAAAACTTAGTAATCACTGACAAATATTTCAATAATCTTATTATCTGATGAAATCGGTAGTCAGGGATT
CATAAATAGAGATGAAGAGAGAGTCCGTTCTCACTGGTCATATATTTATATTCATTATATCTATTCGGCC
GCGGTGCAAAGCGTCGTGGGAAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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