The detailed information of tRNA gene sequence


Sequence ID>CHL1861004711
Genome IDKY819064
Search identical group
Phylum/ClassViridiplantae
SpeciesChlorodesmis fastigiata (KY819064)
Start position on genome 40724
End posion on genome 41001
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctagaagggg
tRNA gene sequence 
GGGGGTATGGCGGAATTGGTAGACGCTGCAGACTTGAGATTTGTTGGTTCTTTGAACCAT
GAGGGTTCAAGTCCCTCTATCCCCAata
Downstream region at tRNA end position 
aataaaatat
Secondary structure (Cloverleaf model)
>CHL1861004711	Ser	TGA
                   g      Aata aataaaatat
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     TGGTTCTTTGAACCAT
                    G + T
                    C - G
                    A - T
                    G + T
                    A - T
                  C       A
                  T       G *
                    T G A
intron: position=38, length=193 (in A-loop)
ACTTGGATAATTGAGCCTTTTTTAAAAAATTAAAAAAGTGAAAGCTCTCAAATTCAGAGAATCGATAAAG
AAACCCTGAGCCAATTCTTTTGCCATATATAGCAAAGAAAGGTGCAGAGACTCGACGGGAGCTATTTTAA
AAAATAAACATTTTTGAGAATAAAGATAGAGTCCATATTCTTTGAATATGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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