The detailed information of tRNA gene sequence


Sequence ID>CHL1861005310
Genome IDMF276985
Search identical group
Phylum/ClassViridiplantae
SpeciesPseudopediastrum sp. CL0201VA (MF276985)
Start position on genome 63702
End posion on genome 64071
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaattattat
tRNA gene sequence 
GGGGATATGGCGGAATGGTAGACGCTACGGACTTAAAATCCGTTGATCTTTGCGATCGTG
AGGGTTCAAGTCCCTCTATCCCCAatt
Downstream region at tRNA end position 
aaattacatc
Secondary structure (Cloverleaf model)
>CHL1861005310	Leu	TAA
                   t      Aatt aaattacatc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGATCTTTGCGATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A *
                    T A A
intron: position=38, length=286 (in A-loop)
AATATTCAATTTTTGAGCCTTCTTAAAATATTTTAAGAAGTGAAAGCTTTCAAAATCAGAAAACCTTTTT
GTTAAAAGAAATAAATATTCTTTGTACTGGGTTCAGCATTTCTGTTACAATGGAATAAAAACAAAAAGCA
ATACTGAGCCAATAGATAAAACTTAAAATTTTTTCTGTTTTATTTTAGGTGCAGAGACTCAATGAAAGCT
ATTTTCTTTTAGTAGAAGATAAAGATAGAGTCCAAAAAAAAATAAAAAATGTTTAACAAGTTTAAATAAA
TAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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