The detailed information of tRNA gene sequence


Sequence ID>CHL1861005666
Genome IDMF975369
Search identical group
Phylum/ClassViridiplantae
SpeciesTetragonia tetragonioides (MF975369)
Start position on genome 46011
End posion on genome 46463
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aaaataaaaa
tRNA gene sequence 
GGGGATATGGCGAAATCGGTAGACGCTACGGACTTAATATCCGTCGACTTTTAAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCAaaa
Downstream region at tRNA end position 
gcttatttca
Secondary structure (Cloverleaf model)
>CHL1861005666	Leu	TAA
                   a      Aaaa gcttatttca
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    C       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTTAAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=368 (in A-loop)
TGGCTTGAGCCTTAGTATGGAAACCTACTAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATTAAAA
AAAATGGGCAATCCTGAGCCAACTCCTTTTTTCAAAAGCAAAAAAAGAAGGTTTTAGAAAGCAAGAAAAA
AAGGATAGGTGCAGAGACTCAAAGGAAGCTATTCTAACAAATGGGGTTGACTGTATTGTTATAAGAATTC
GTCCAAGTTGAAAAAATGAATCAAATATTCATTCATCAAATCATTCACTCCATAGTCTGATAGATCTTTT
GAAGAACTGATTAATTGGACGAGAATGAAGATAGAGTCCCGTTCTACATGTCAATACTGACAACAATGAA
ATTTATAGTAAGAGGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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