The detailed information of tRNA gene sequence


Sequence ID>CHL1861006042
Genome IDMG551489
Search identical group
Phylum/ClassViridiplantae
SpeciesLancea hirsuta (MG551489)
Start position on genome 144154
End posion on genome 144272
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctttcaagat
tRNA gene sequence 
GCCTTGGTGGTGAAATGGTAGACACGCGAGACTCAAAATCTCGTGCTAAAGAGCGTGGAG
GTTCGAGTCCTCTTCAAGGCAtaa
Downstream region at tRNA end position 
tattgagaat
Secondary structure (Cloverleaf model)
>CHL1861006042	Leu	CAA
                   t      Ataa tattgagaat
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C
                     G + T          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    G       A G T G       G G A G G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGCTAAAGAGCGT
                    C - G
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A *
                    C A A
intron: position=38, length=38 (in A-loop)
ATCTCGTGCTAAAGAGCGTGGAGGTTCGAGACCTCAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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