The detailed information of tRNA gene sequence


Sequence ID>CHL1861006263
Genome IDMG882489
Search identical group
Phylum/ClassViridiplantae
SpeciesPisum sativum subsp. elatius (MG882489)
Start position on genome 13201
End posion on genome 12685
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agaaaaaacg
tRNA gene sequence 
GGGGATATGGCGAAATTGGTAGACGCTACGGACTTAATATCCGTCGACTTTAGAAATCGT
GAGGGTTCAAGTCCCTCTATCCCCAaaa
Downstream region at tRNA end position 
gccaattaaa
Secondary structure (Cloverleaf model)
>CHL1861006263	Leu	TAA
                   g      Aaaa gccaattaaa
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       A G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        T     CGACTTTAGAAATCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A A
intron: position=38, length=432 (in A-loop)
TGGATTGAGCCTTGGTATGGAAACTTACCAAGTGAAAACTTTCAAATTCAGAGAAACCCTGGAATTCAAA
ATGGGCAATCCTGAGCCAAATCCTTCTTTCTGAAAACAAATAAAAGTTCAGAAAGTGAAAATCAAAAAAG
GATAGGTGCAGAGACTCAATGGAAGCTGTTCTAACAAATGGAGTTGACAACATTCAATTGATTAATGAAG
ATTTCTAACTTCTATTTGTAACTATTTTGATTCTATCACAATGGAAACATTAGAATCAATTACAACTGGA
AGAAAAAATGACTGAATATTCATTGCTCAAATCAGTCACTCCACCATAATCTGATGGATCTTTTGAATAA
CTGATTAATCAGACGAGAATAAAGATAGAGTCCCATTCTACATGTCAATACCGACATCAATGAAATTTTT
AGTAAGAGGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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