The detailed information of tRNA gene sequence


Sequence ID>CHL1899102810
Genome IDKJ461680
Search identical group
Phylum/ClassViridiplantae
SpeciesKlebsormidium flaccidum (KJ461680)
Start position on genome 162607
End posion on genome 161981
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tagaatactT
tRNA gene sequence 
GGGCTATTAGCTCAGTGGTTAGAGCGCGCCCCTGATAAGTGCGAGGCCTCTGGTTCAAAT
CCAGAATGGCCCATCC
Downstream region at tRNA end position 
gcgatttgtg
Secondary structure (Cloverleaf model)
>CHL1899102810	Ile	GAT
                   T      ATCC gcgatttgtg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     A G A C C     A
      T G A        A      | | | | |     A
    G       C T C G       T C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGCC
                    C - G
                    G - C *
                    C - G
                    C   T
                    C - G
                  C       A
                  T       A
                    G A T
intron: position=43, length=550
GCCGCAAGAGGTGAGCCCAGGGTGGATCTCAGTTTCCTTTGATAAAAAGGTTTGAGGCCTTGCCAGCGCC
TGACCGGGCCAAGGATCCTAGGGACCCTAGCATGGCGCAAGAGCAGAGCAGTCGGGGCATGCAAACCATT
GAATAGCAAACTGAAAAATAAGATGAGAAAAAGAATAGAGTAATACCTTTCTTTCTTCCCCCTATGTCGG
GACATCGGTGCTGAGAATCTAGGGCTTACTTATCCGCCCCAGGATCTATGGTCATCTCTTGGCTCACTCC
ACTCTTTTTTCTTTTTTTACAGGCAAGCTATACCCTCGACTGCATTCCCATGGGCTTTTCACTGCGGGAT
CCCTTTCTGAAGAAGGGACGGCGACATCACACTTTGGAGGTTTTCTTTTTCTTTAAAACATTGAGAATGA
AAATAGATCTTTCCAAAAAAGATGTCAGGGTAGTCTATTTCGAATAGAATAGATACCTAGAGAGCGCAGT
ACGGCGAGAAGTCGTATGTTGTGCTTGAGGAACTTTCTTAGAATAAGAAGTTCCACGGGC
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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