The detailed information of tRNA gene sequence


Sequence ID>CHL1830000464
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 69522
End posion on genome 69594
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgtaacacaa
tRNA gene sequence 
GCCCCCATCGTCTAGTGGCCTAGGACATCTCCCTTTCACGGAGGTAACAGGGATTCGAAT
TCCCTTGGGGGTAtta
Downstream region at tRNA end position 
aaataaaact
Secondary structure (Cloverleaf model)
>CHL1830000464	Glu	TTC
                   a      Atta aaataaaact
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C T     A
      T G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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