The detailed information of tRNA gene sequence


Sequence ID>CHL1830001187
Genome IDKU164871
Search identical group
Phylum/ClassStramenopiles
SpeciesPleurocladia lacustris Sa2 (KU164871)
Start position on genome 80039
End posion on genome 80113
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cttgcccctT
tRNA gene sequence 
GCCCCTATCGTCTAGCGGCCTAGGACCTCTCCTTTTCACGGAGATAACAGGGATTCGAGT
TCCCTTGGGGGTAGgt
Downstream region at tRNA end position 
aaggggcaag
Secondary structure (Cloverleaf model)
>CHL1830001187	Glu	TTC
                   T      AGgt aaggggcaag
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     T C C C T     A
      C G A        C      | | | | |     G
    G       T C T G       A G G G A     C
    G       + | | |                 T T
    C       G G A C
      C T A        C     TAAC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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