The detailed information of tRNA gene sequence


Sequence ID>CHL1830001189
Genome IDKU164871
Search identical group
Phylum/ClassStramenopiles
SpeciesPleurocladia lacustris Sa2 (KU164871)
Start position on genome 66130
End posion on genome 66058
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaagtataaa
tRNA gene sequence 
GACTCTGTAGCTCAGTGGTTAGAGTAGGGGACTCATAAGCCCTTGGTCGCAGGTTCAAAT
CCAGCCAGAGTTAttc
Downstream region at tRNA end position 
ttatggtgag
Secondary structure (Cloverleaf model)
>CHL1830001189	Met	CAT
                   a      Attc ttatggtgag
                     G + T
                     A - T
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C G A C C     A
      T G A        A      | |   | |     A
    G       C T C G       G C A G G     C
    G       | | | +                 T T
    T       G A G T
      T A          A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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