The detailed information of tRNA gene sequence


Sequence ID>CHL1861000205
Genome IDGU191334
Search identical group
Phylum/ClassViridiplantae
SpeciesEquisetum arvense (GU191334)
Start position on genome 34833
End posion on genome 34496
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atttttaaag
tRNA gene sequence 
GGGGGTATGGCGGAATGGTAGACGCTACGGACTTAGTATCCGTTGGTTTTTTACAACCGT
GAGGGTTCAAATCCCTCTACCCCCActc
Downstream region at tRNA end position 
aaatttaaga
Secondary structure (Cloverleaf model)
>CHL1861000205	Leu	TAG
                   g      Actc aaatttaaga
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGGTTTTTTACAACCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       T *
                    T A G
intron: position=38, length=253 (in A-loop)
AAGATTGAGCGTCAGTATGGTAACTTACTGAATGGCAGCTTTCAAATTCAGGGAAACCTAGGCCTTTTGA
TAGACAATCCTGAGCCAAATTCTACCTAGAATAGGTGCAGAGACTCAATGGAAGCTATTCTAACAATGAT
TCAAAATATTGACTGAAAAGAAAAAAATTGAATCTTTGAAAAGTGAGAATAAAGATAGAGTCCTATTTTA
TATTGTTTTTGTTAACAACAATGCAAATTGTGATAGAAAGAAA
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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