The detailed information of tRNA gene sequence


Sequence ID>C183002005
Genome IDCP025312
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETCHI1b [CP025312]
Start position on genome 113627
End posion on genome 113554
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gagttagcaa
tRNA gene sequence 
GCGGCTGTAACTCAGCGGTTAGAGTGTAAGCGTGTCAAGCTTAAAGCCACGGGCTCGAAC
CCCGTTAGCCGTGCgc
Downstream region at tRNA end position 
acaattgggc
Secondary structure (Cloverleaf model)
>C183002005	Asp	GTC
                   a      GCgc acaattgggc
                     G + T
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G + T          C A
                    T     T G C C C     A
      C G A        A      | | | | |     G
    G       C T C A       A C G G G     C
    G       | | | |                 C T
    T       G A G T
      T A          G     AAGCC
                    T - A
                    A - T
                    A - T
                    G - C
                    C - G
                  G       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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