The detailed information of tRNA gene sequence


Sequence ID>C183002015
Genome IDCP025316
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETAUR1a [CP025316]
Start position on genome 29788
End posion on genome 29717
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
actgagcacc
tRNA gene sequence 
AGGCTTGTAGTTTAGTGGCAAAACGTACGCCCGATAAGCGTAAGTCCAACAGTTCGAGTC
TGTTCGAGCCTAtgg
Downstream region at tRNA end position 
aatatagcca
Secondary structure (Cloverleaf model)
>C183002015	Ile	GAT
                   c      Atgg aatatagcca
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     T + G
                     G - C          T G
                    T     T T G T C     A
        G A        A      | | | | |     G
      T     T T T G       A A C A G     C
      G     | | | |                 T T
      G     A A A C
        C A        G     AGTCC
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  C       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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