The detailed information of tRNA gene sequence


Sequence ID>C183002034
Genome IDCP025404
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola TETLON2b [CP025404]
Start position on genome 28661
End posion on genome 28586
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
attgaacatT
tRNA gene sequence 
AGGCTTGTAGTTTAGTGGCAAAAAACGTACGCCCGATAAGCGTGAGTTCAACAGTTCGAG
TCTGTTCAAGCCTATgg
Downstream region at tRNA end position 
aatatagcca
Secondary structure (Cloverleaf model)
>C183002034	Ile	GAT
                   T      ATgg aatatagcca
                     A - T
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    T     T T G T C     A
      T G A        A      | | | | |     G
    G       T T T G       A A C A G     C
    G       | | | |                 T T
    C       A A A C
      A A A        G     AGTTC
                    T + G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  C       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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