The detailed information of tRNA gene sequence


Sequence ID>C183002049
Genome IDCP025435
Search identical group
Phylum/ClassActinomycetota
SpeciesGordonia sp. YC-JH1 [CP025435]
Start position on genome 1786715
End posion on genome 1786809
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gttggtctgc
tRNA gene sequence 
GGAGGCGTCTGGGTTCCTGGTGGGCCCCCGGTCTTCAAAACCGGTGAGGTCGAGTATCTC
GGTCTGGCGGGTTCGATTCCCGTCCGTCTCCGCCA
Downstream region at tRNA end position 
aactctctcg
Secondary structure (Cloverleaf model)
>C183002049	SeC	TCA
                   c      GCCA aactctctcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     C - G
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C T        T      + | | | |     G
    T       T G G G       G C G G G     C
    G       +   | |                 T T
    G       G G C C
      T G          C     TGAGGTCGAGTATCTCGGTCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.-

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